Visualizing common or rare regulatory variants in T-ALL samples on Cohort View.
Sample View of interchromsomal rearrangement leading to
dysregulation by enhancer hijacking.
Assessing aberrant splicing in
caused by somatic splice site variants.
dysregulation by enhancer duplications in pediatric cancers.
Visualizing intratumor heterogeneity of TCGA GBM at
Online example 1:
bi-allelic loss in adrenocortical tumors.
Online example 2:
haploinsufficiency in B-ALL.
Online example 3:
alteration status in T-ALL and the association with patient outcome.
Online example 4:
expression in AML with patient outcome.
Online example 5:
Matrix View of mutual-exclusive or co-mutation patterns and association with patient outcome.
Online example 6:
splice site mutation causing intron retention inspected via Sample View.
Online example 7:
APOBEC signature is associated with kataegis as revealed by rainfall plot in Sample View.
Online example 8:
TCGA DLBC cohort mutation profile over
Online example 9:
TCGA SKCM cohort mutation profile over
Supplementary figure 2:
Diverse alterations in B-ALL targeting
Supplementary figure 3:
CNV and chromatin interactions over
and its enhancers.
Supplementary figure 4:
DUX4 but not NOTCH1 likely binds at N-ME in NALM6.
Supplementary figure 5:
-amplified GBM, clonality of oncogenic coding mutations can vary with the presence or absence of the vIII isoform.
Supplementary figure 6:
exon 8 ITD event along with the reinterpretation of a sequence mutation.